Changelog

metamoRph 0.2.1

• new vignette on building a sex predictor
• fixed bug where giving the sample labels as a numeric/integer vector threw an error (they get used as column names at one point and R hates that)
• add warning to metamoRph function when center/scale values not provided

metamoRph 0.2.0

• two new functions, select_HVG and normalize_data have been pulled out of partially duplicated code in run_pca and metamoRph to ease future normalization additions and to modularize the code-base
• irlba added as a prcomp alternative to speed up large single cell dataset dimensionality reduction
• add a new sample normalization method: Seurat’s “LogNormalize”
• two new scRNA-seq vignettes added

metamoRph 0.1.3

• run_pca and metamoRph now support sparseMatrix

metamoRph 0.1.2

• add tests with testthat
• tweak Metadata Label Transfer on Real Data vignette plots to mark tissue grouping with ggforce::geom_mark_ellipse

metamoRph 0.1.1

• improve the vignettes
• add extract_prcomp_scaling()function to yank center/scale information from prcomp object

metamoRph 0.1.0

• release